hard facts fast
Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession Z96992: Comparing with sequences in the identified database
Accession number: Z96992 Genbank entry
Species annotation: Geopyxis sp. 2156.H
Annotation: Geopyxis sp. 5.8S rRNA gene and ITS1 and ITS2 DNA (strain 2156.H).
Source publication: Vralstad,T., Holst-Jensen,A. and Schumacher,T. The postfire discomycete Geopyxis carbonaria (Ascomycota) is a biotrophic root associate with Norway spruce (Picea abies) in nature Mol. Ecol. 7 (5), 609-616 (1998)
Date of inclusion: 2010-08-18
Present best BLAST match: Z96991 Genbank entry
Species annotation of this match: Geopyxis rehmii ToL?
Annotation of this match: Geopyxis rehmii 5.8S rRNA gene and ITS1 and ITS2 DNA (strain
BLAST E-value and score of this match (against Z96992): 0.0, 936
Source publication: Vralstad,T., Holst-Jensen,A. and Schumacher,T. The postfire discomycete Geopyxis carbonaria (Ascomycota) is a biotrophic root associate with Norway spruce (Picea abies) in nature Mol. Ecol. 7 (5), 609-616 (1998)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match.
Alignment
Below is the alignment of the insufficiently identified sequence (Z96992) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 97.9779411764706 Length: 585 bp. Number of gaps: 1129
Z96992 --------ATAGGGTAAATTGATAAATCCCATATAGAAGTAATTAACAGCCCCCTTCAGA
Z96991 GTCNNNNGTTAGGGTAAATTGATAAATCCCATATAGAAG----TAACAGCTCCCTTCACC
****************************** ******* *******
Z96992 AGGGGGGGCCTTCTCACTACCAAGTGAGAGGGTGCCTTCGCGGGATGTACGGTAAAAGTC
Z96991 AGAAGGGG-----------------------GTGCCTTCGCGGGATGTACGGTAAAAGTC
** **** *****************************
Z96992 CGTAGCCTTTTTTGGTATTACCATAACTCTTCTGTGTACCTATTACTTGTTGCTTCCCTG
Z96991 CGTAGCCTTTTTTGGTATTACCATAACTCTTCTGTGTACCTATTACTTGTTGCTTCCCTG
************************************************************
Z96992 GGGTAACTCAGGGAAGGCATACATATACTCTGCTTATTGCAGTCAGTCTGAACTTGTTTA
Z96991 GGGTAACTCAGGGAAGGCATACATATACTCTGCCTATTGCAGTCAGTCTGAACTTGTTTA
********************************* **************************
Z96992 TTTATAAACGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGC
Z96991 TTTATAAACGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGC
************************************************************
Z96992 AGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACG
Z96991 AGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACG
************************************************************
Z96992 CACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATCAAAACTACTC
Z96991 CACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATCAAAACTACTC
************************************************************
Z96992 AAGCTAAGGTTTACCTTCTGCTTGGTCTTGGAATTGGAATACAATGTTTCCTTTCTGAAA
Z96991 AAGCTAAGGTTTACCTTCTGCTTGGTCTTGGAACTGGAATATAATGTTTCCTTTCTGAAA
********************************* ******* ******************
Z96992 TACAGTGGCGAATTGACTGTGCTGTAAACGTAGTAACTTTACCCGTTGAAAGCATGTTCA
Z96991 TACAGTGGCGAATTGACTGTGCTGTAAACGTAGTAACTTTACCCGTTGAAAGCATGTTCA
************************************************************
Z96992 CATTCCGCCATAACCCCCTCTATTATCTNGTTTGACCTC------
Z96991 CATTCCGCCATAACCCCCTCTATTNTCTAGTTTGACCTCGGATCA
************************ *** **********
Accession Z96992: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: AY465441 Genbank entry
Species annotation of this match: Geopyxis sp. T2S25
Annotation of this match: Geopyxis sp. T2S25 18S ribosomal RNA gene, partial sequence;
BLAST E-value and of this match (against Z96992): 0.0, 983
Source publication: Ganley,R.J. and Newcombe,G. Fungal endophytes in seeds and needles of Pinus monticola Mycol. Res. 110 (PT 3), 318-327 (2006)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (Z96992) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 97.5308641975309 Length: 589 bp. Number of gaps: 1156
Z96992 ------------------ATAGGGTAAATTGATAAATCCCATATAGAAGTAATTAACAGC
AY465441 CATTAAAAATTCAATGACATAGGGTAAATTGATAAATCCCAGATAGAAGTAAC-AGCCCC
*********************** ********** * * *
Z96992 CCCCTTCAGAAGGGGGGGCCTTCTCACTACCAAGTGAGAGGGTGCCTTCGCGGGATGTAC
AY465441 TTTCACCAGAAGGGGGGGCCTCCTCACTACCAAGTGAGAGGGTGCCTTCGCGGGATGTAC
* *************** **************************************
Z96992 GGTAAAAGTCCGTAGCCTTTTTTGGTATTACCATAACTCTTCTGTGTACCTATTACTTGT
AY465441 GGTAAAAGTCCGTAGCCTTTTTTGGTATTACCATAACTCTTCTGTGTACCTATTACTTGT
************************************************************
Z96992 TGCTTCCCTGGGGTAACTCAGGGAAGGCATACATATACTCTGCTTATTGCAGTCAGTCTG
AY465441 TGCTTCCCTGGGGTAACTCAGGGAAGGCATACATATACTCTGCCTATTGCAGTCAGTCTG
******************************************* ****************
Z96992 AACTTGTTTATTTATAAACGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGA
AY465441 AACTTGTTTATTTATAAACGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGA
************************************************************
Z96992 TGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAA
AY465441 TGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAA
************************************************************
Z96992 TCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATC
AY465441 TCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATC
************************************************************
Z96992 AAAACTACTCAAGCTAAGGTTTACCTTCTGCTTGGTCTTGGAATTGGAATACAATGTTTC
AY465441 AAAACTACTCAAGCTAAGGTTTACCTTCTGCTTGGTCTTGGAATTGGAATATAATGTTTC
*************************************************** ********
Z96992 CTTTCTGAAATACAGTGGCGAATTGACTGTGCTGTAAACGTAGTAACTTTACCCGTTGAA
AY465441 CTTTCTGAAATACAGTGGCGAATTGACTGTGCTGTAAACGTAGTAACTTTACCCGTTGAA
************************************************************
Z96992 AGCATGTTCACATTCCGCCATAACCCCCTCTATTATCTNGTTTGACCTC
AY465441 AGCATGTTCACATTCCGCCATAACCCCCTCTATTATCTAGTTTGAC---
************************************** *******
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