emerencia - hard facts fast

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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.

Accession AY805596: Comparing with sequences in the identified database

Accession number: AY805596 Genbank entry
Species annotation: Verticillium sp. olrim438
Annotation: Verticillium sp. olrim438 18S ribosomal RNA gene, partial
Source publication: Menkis,A., Allmer,J., Vasiliauskas,R., Lygis,V., Stenlid,J. and Finlay,R. Ecology and molecular characterization of dark septate fungi from roots, living stems, coarse and fine woody debris Mycol. Res. 108 (PT 8), 965-973 (2004)
Date of inclusion: 2010-08-18
Present best BLAST match: JX976070 Genbank entry
Species annotation of this match: Mortierella exigua ToL?
Annotation of this match: Mortierella exigua strain CBS 865.68 internal transcribed spacer 1,
BLAST E-value and score of this match (against AY805596): 0.0, 1065
Source publication: Wagner,L., Stielow,B., Hoffmann,K., Petkovits,T., Papp,T., Vagvolgyi,C., de Hoog,G.S., Verkley,G. and Voigt,K. A comprehensive molecular phylogeny of the Mortierellales (Mortierellomycotina) based on nuclear ribosomal DNA Persoonia 30, 77-93 (2013)
Date of inclusion of this match: 2014-11-03
Previous best BLAST match: FJ161929 Genbank entry
Species annotation of previous best BLAST match: Mortierella exigua ToL?
Annotation of this match: Mortierella exigua voucher MT153 internal transcribed spacer 1,
BLAST E-value and score of this match (against AY805596): 0.0, 850
Source publication: Tang,A.M. and Jiang,Y. Phylogenetic relationships between genera within Mucoromycotina (Endogonales, Mortierellales and Mucorales) based on individual and combined analyses of ITS and LSU rDNA sequences Unpublished
Date of inclusion of this match: 2010-08-18

Alignment

Below is the alignment of the insufficiently identified sequence (AY805596) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.

Percent identity (of non-gapped bp.): 64.9459783913565 Length: 608 bp. Number of gaps: 1737

   
 
 JX976070        CATTCATAATAAGTGTTTTATGGCACTTTTTAAATCCATATCCACCTTGTGTGCAATGTC
 FJ161929        --TTCATAATAAGTGTTTTATGGCACTTTTTAAATCCATATCCACCTTGTGTGCAATGTC
 AY805596        ----CTTGATTTGAGATCGA--GTTTTACAAGAATCGTTGCCGACCCT-TGTGAAATCCT
                     * * **  * * *  *  *   *     ****  *  * *** * **** ***   
 
 JX976070        AGTTGTTCTCTCTTTTG-AGAATGACCAAACATCAACTTATTCTTT-AACTCTTTGTCTG
 FJ161929        AGTTGATCTTCTTTATGGAGATCGACCAAACATCAACCTATTTTTTTAACTCTTTGTCTG
 AY805596        GCATCAGTCAGCCAATA-----CGGTCAAAC-TCCCTTTATGTTAGCTGCAGCAAAAGTA
                    *           *       *  ***** **    ***  *     *        * 
 
 JX976070        AAAAATATTATGAATAAAATAATTCAAAATACAACT--TTCAACAACGGATCTCTTGGCT
 FJ161929        AAAAATATTATGAATAAA-TAATTCAAAATACAACT--TTCAACAACGGATCTCTTGGCT
 AY805596        ATAATCCGTTTGACGGGACTAAATAAATATGCTTTTAGCTCAGGAGAATGTCCAGCTGCA
                 * **    * ***    * *** * ** ** *   *   ***  *     **     ** 
 
 JX976070        CTCGCATCG-ATGAAGAACGCAGCGAAATGCGATACGTAATGT--GAATTGCAGAATTC-
 FJ161929        CTCGCATCG-ATGAAGAACGCAGCGAAATGCGATACGTAATGT--GAATTGCAGAATTC-
 AY805596        CCTGCATTTCAAGCAACCCTCCACCGATCGTAAAGACTGGTGTTGGGATTGCTCAAGTCC
                 *  ****   * * *   * *  *  *  *  *    *  ***  * *****  ** ** 
 
 JX976070        --AGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGC
 FJ161929        --AGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGC
 AY805596        AAAGCCATTCAAAACAAATTGAAGACTTTGAGGTGTTTACTGATACTCAAACAAGCATGC
                   **  * ***    *  **  *     *   * * *   ** ** **  *  *******
 
 JX976070        TTGTTTGAGTATCAGTAAACACCTCAAAGACTTCAATTTGTTTTGAATGGCTTTGGACTT
 FJ161929        TTGTTTGAGTATCAGTAAACACCTCAAAGCTTTTGATTTTTTTTAAA-AGTTTTGGACTT
 AY805596        TCTTCGGAATACCAAAGAGCGCAATATGCGTTCAAA---GATTCGATGATTCACTGAATT
                 *  *  ** ** **   * * *   *     *   *     **  *         ** **
 
 JX976070        GAGCAATCCCAACACCAGTCTTT-AC-GATCGGTGGAGGGTTGCTTGAAATGCAGGTGCA
 FJ161929        GAGCAATCCCAACACCGGTCTTTTACAGATCGGCGGCGGGTTGCTTGAAATGCAGGTGCA
 AY805596        CTGCAATTC--ACATTA-CGTATCGCATTTCGCTGCGTTCTTCATCG--ATGCGAGAGC-
                   ***** *  ***      * *  *   ***  *     **  * *  ****  * ** 
 
 JX976070        GCTGGACATTCTCCTGAGCTAAAAGCATATTTATTTAGTCCCGTCAAACGGATTATTACT
 FJ161929        GCTGGACATTCTCCTGAGCTAAAAGCATATTTATTTAGTCCCGTCAAACGGATTATTACT
 AY805596        -CAAGAGATCCGTT---GTTGAAAGT---TGTATTT------------TGAATTATTTTA
                  *  ** ** *      * * ****    * *****             * ******   
 
 JX976070        TTTGCTGCAGCTAACATAAAGGGAGTTTGACCGTATTGGCTGACTGATGCAGGATTTCAC
 FJ161929        TTTGCTGCAGCTAATATAAAGGGAGTTTGACCGTATTGGCTGACTGATGCAGGATTTCAC
 AY805596        TTCATAATATTTTTCAGACAAAGAGTTAAA--GAATAAGTTGATGTTTGGTCGCTCTCAA
                 **      *  *   * * *  *****  *  * **  * ***    **   * * *** 
 
 JX976070        AAGGGTCGGCAACGATTCTTGTA---AAACTCGATCTCAAATCAAGTAAGACTACCCGCT
 FJ161929        AAGGGTCGGCAACGATTCTTGTA---AAACTCGATCTCAAATCAAGTAAGACTACCCGCT
 AY805596        AAGAGAGAACGACTGACATTGCACACAAGGTGGATATGGATTTAAAAAGTGCCATA----
                 *** *    * **     *** *   **  * *** *  * * **  *   * *      
 
 JX976070        GAACTT--
 FJ161929        GAACTTAA
 AY805596        --------

Accession AY805596: Comparing with sequences in the insufficiently identified database


   Present best BLAST match to the insufficiently identified database: FN397395 Genbank entry
   Species annotation of this match: uncultured fungus 
   Annotation of this match: Uncultured fungus genomic DNA sequence containing 18S rRNA gene,
   BLAST E-value and of this match (against AY805596): 0.0, 1088
   Source publication: Napoli,C., Mello,A., Borra,A., Vizzini,A., Sourzat,P. and Bonfante,P. Tuber melanosporum, when dominant, affects fungal dynamics in truffle grounds New Phytol. (2009) In press REMARK Publication Status: Available-Online prior to print
   Date of inclusion of this match: 2010-08-18
 
      This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.

Alignment

Below is the alignment of the insufficiently identified sequence (AY805596) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.

Percent identity (of non-gapped bp.): 99.8191681735986 Length: 675 bp. Number of gaps: 1228

   
 
 AY805596        ------------------------------------------CTTGATTTGAGATCGAGT
 FN397395        TCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAGTCTTACTTGATTTGAGATCGAGT
                                                           ******************
 
 AY805596        TTTACAAGAATCGTTGCCGACCCTTGTGAAATCCTGCATCAGTCAGCCAATACGGTCAAA
 FN397395        TTTACAAGAATCGTTGCCGACCCTTGTGAAATCCTGCATCAGTCAGCCAATACGGTCAAA
                 ************************************************************
 
 AY805596        CTCCCTTTATGTTAGCTGCAGCAAAAGTAATAATCCGTTTGACGGGACTAAATAAATATG
 FN397395        CTCCCTTTATGTTAGCTGCAGCAAAAGTAATAATCCGTTTGACGGGACTAAATAAATATG
                 ************************************************************
 
 AY805596        CTTTTAGCTCAGGAGAATGTCCAGCTGCACCTGCATTTCAAGCAACCCTCCACCGATCGT
 FN397395        CTTTTAGCTCAGGAGAATGTCCAGCTGCACCTGCATTTCAAGCAACCCTCCACCGATCGT
                 ************************************************************
 
 AY805596        AAAGACTGGTGTTGGGATTGCTCAAGTCCAAAGCCATTCAAAACAAATTGAAGACTTTGA
 FN397395        AAAGACTGGTGTTGGGATTGCTCAAGTCCAAAGCCATTCAAAACAAATTGAAGACTTTGA
                 ************************************************************
 
 AY805596        GGTGTTTACTGATACTCAAACAAGCATGCTCTTCGGAATACCAAAGAGCGCAATATGCGT
 FN397395        GGTGTTTACTGATACTCAAACAAGCATGCTCTTCGGAATACCAAAGAGCGCAATATGCGT
                 ************************************************************
 
 AY805596        TCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATTACGTATCGCATTTCGCTGCG
 FN397395        TCAAAGATTCGATGATTCACTGAATTCTGCAATTCACATTACGTATCGCATTTCGCTGCG
                 ************************************************************
 
 AY805596        TTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTGTATTTTGAATTATTTT
 FN397395        TTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTGTATTTTGAATTATTTT
                 ************************************************************
 
 AY805596        ATTCATAATATTTTTCAGACAAAGAGTTAAAGAATAAGTTGATGTTTGGTCGCTCTCAAA
 FN397395        ATTCATAATATTTTTCAGACAAAGAGTTAAAGAATAAGTTGATGTTTGGTCGCTCTCAAA
                 ************************************************************
 
 AY805596        AGAGAGAACGACTGACATTGCACACAAGGTGGATATGGATTTAAAAAGTGCCATA-----
 FN397395        AGAGAGAACAACTGACATTGCACACAAGGTGGATATGGATTTAAAAAGTGCCATAAAACA
                 ********* *********************************************     
 
 AY805596        ------------------------------------------------------------
 FN397395        CTTATTATGAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTTTACTT
                                                                             
 
 AY805596        ---------------
 FN397395        CCTCTAAATGACCAA

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