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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310861: Comparing with sequences in the identified database
Accession number: AY310861 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM2080 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: AF272902 Genbank entry
Species annotation of this match: Tomentella stuposa ToL?
Annotation of this match: Tomentella stuposa specimen-voucher TAA159498 internal transcribed
BLAST E-value and score of this match (against AY310861): 0.0, 1061
Source publication: Koljalg,U., Dahlberg,A., Taylor,A.F., Larsson,E., Hallenberg,N., Stenlid,J., Larsson,K.H., Fransson,P.M., Karen,O. and Jonsson,L. Diversity and abundance of resupinate thelephoroid fungi as ectomycorrhizal symbionts in Swedish boreal forests Mol. Ecol. 9 (12), (2000)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310861) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 98.4293193717278 Length: 624 bp. Number of gaps: 1197
AY310861 CATTACCGAATTGTCAACAAGAGCTGTTGCTGGTCCCCGTACGGGGGCATGTGCACGCTT
AF272902 ----------------------------------------ACGGGG-CATGTGCACACTT
****** ********* ***
AY310861 TGTTTACACATCCACTCACACCTGTGCACCCTCCGTAGTTCTATGGCCTGGGTGGGCTCT
AF272902 TGTTTACACATCCACTCACACCTGTGCACCCTCCGTAGTTCTATGGCCTGGGTGGGCTCT
************************************************************
AY310861 GCCCTCCTGGCGTGGTTCTATGTCTTTACACACACACTACAATGAAGTCTTATGGAATGT
AF272902 GTCCTCCTGGCGTGGTTCTACGTCTTTACACACACACTACAACAAAGTCTTATGGAATGT
* ****************** ********************* ****************
AY310861 ATGTCGCGTTTAACGCAATGAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATC
AF272902 ATGTCGCGTTTAACGCAATGAAATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATC
************************************************************
AY310861 GATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG
AF272902 GATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCG
************************************************************
AY310861 AATCTTTGAACGCACCTTGCGCCCTTTGGCTATTCCGAAGGGCATGCCTGTTTGAGTATC
AF272902 AATCTTTGAACGCACCTTGCGCCCTTTGGCTATTCCGAAGGGCATGCCTGTTTGAGTATC
************************************************************
AY310861 ATGAACACCTCAACTCTCATGGCTTGCCATGATGAGCTTGGACTTTGGGGGTTTTGTTGG
AF272902 ATGAACACCTCAACTCTCATGGCTTGCCATGATGAGCTTGGACTTTGGGGGTCTTGTTGG
**************************************************** *******
AY310861 CCTGTGAGCCAGCTCCTCTTAAATGAATTAGCTTGCCGGTGTTTGGTGGCGTCACGGGTG
AF272902 CCTGTGAGCCAGCTCCTCTTAAATGAATTAGCTTGCCGGTGTTTGGTGGCGTCACGGGTG
************************************************************
AY310861 TGATAACTATCTACGCTTGTGGTTTCCCACCAGGTAACCTTCAGCAATGAAGGTTCATCG
AF272902 TGATAACTATCTACGCTTGTGGTTTCCCACCAGGTAACCTTCAGCAATGGAGGTTCGCCG
************************************************* ****** **
AY310861 GAGCTTATAAATGTCTCTCCTCGGTGAGGACACATTTTGACCATTTGATCTCAAATCAGG
AF272902 GAGCTTATAAATGTCTCTCCTCGGTGAGGACACATTTTGACCATTTGATCTCAAATCAGG
************************************************************
AY310861 TAGGACTACCCGCT----------
AF272902 TAGGACTACCCGCTGAACTTAAGC
**************
Accession AY310861: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: DQ822830 Genbank entry
Species annotation of this match: Tomentella sp. KGP88
Annotation of this match: Tomentella sp. KGP88 18S ribosomal RNA gene, partial sequence;
BLAST E-value and of this match (against AY310861): 0.0, 1217
Source publication: Peay,K.G., Bruns,T.D., Kennedy,P.G., Bergemann,S.E. and Garbelotto,M. A strong species-area relationship for eukaryotic soil microbes: island size matters for ectomycorrhizal fungi Ecol. Lett. 10 (6), 470-480 (2007)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310861) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 100 Length: 789 bp. Number of gaps: 1403
AY310861 ------------------------------CATTACCGAATTGTCAACAAGAGCTGTTGC
DQ822830 CAGGTTTCCGTAGGTGACCTGCGGAAGGATCATTACCGAATTGTCAACAAGAGCTGTTGC
******************************
AY310861 TGGTCCCCGTACGGGGGCATGTGCACGCTTTGTTTACACATCCACTCACACCTGTGCACC
DQ822830 TGGTCCCCGTACGGGGGCATGTGCACGCTTTGTTTACACATCCACTCACACCTGTGCACC
************************************************************
AY310861 CTCCGTAGTTCTATGGCCTGGGTGGGCTCTGCCCTCCTGGCGTGGTTCTATGTCTTTACA
DQ822830 CTCCGTAGTTCTATGGCCTGGGTGGGCTCTGCCCTCCTGGCGTGGTTCTATGTCTTTACA
************************************************************
AY310861 CACACACTACAATGAAGTCTTATGGAATGTATGTCGCGTTTAACGCAATGAAATACAACT
DQ822830 CACACACTACAATGAAGTCTTATGGAATGTATGTCGCGTTTAACGCAATGAAATACAACT
************************************************************
AY310861 TTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTA
DQ822830 TTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTA
************************************************************
AY310861 ATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGC
DQ822830 ATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGC
************************************************************
AY310861 TATTCCGAAGGGCATGCCTGTTTGAGTATCATGAACACCTCAACTCTCATGGCTTGCCAT
DQ822830 TATTCCGAAGGGCATGCCTGTTTGAGTATCATGAACACCTCAACTCTCATGGCTTGCCAT
************************************************************
AY310861 GATGAGCTTGGACTTTGGGGGTTTTGTTGGCCTGTGAGCCAGCTCCTCTTAAATGAATTA
DQ822830 GATGAGCTTGGACTTTGGGGGTTTTGTTGGCCTGTGAGCCAGCTCCTCTTAAATGAATTA
************************************************************
AY310861 GCTTGCCGGTGTTTGGTGGCGTCACGGGTGTGATAACTATCTACGCTTGTGGTTTCCCAC
DQ822830 GCTTGCCGGTGTTTGGTGGCGTCACGGGTGTGATAACTATCTACGCTTGTGGTTTCCCAC
************************************************************
AY310861 CAGGTAACCTTCAGCAATGAAGGTTCATCGGAGCTTATAAATGTCTCTCCTCGGTGAGGA
DQ822830 CAGGTAACCTTCAGCAATGAAGGTTCATCGGAGCTTATAAATGTCTCTCCTCGGTGAGGA
************************************************************
AY310861 CACATTTTGACCATTTGATCTCAAATCAGGTAGGACTACCCGCT----------------
DQ822830 CACATTTTGACCATTTGATCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCA
********************************************
AY310861 ------------------------------------------------------------
DQ822830 ATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAAGCGGGAAG
AY310861 ------------------------------------------------------------
DQ822830 AGCTCAAATTTAAAATCTGGCGTGCCTCTGGTCGCCCGAGTTGTAGTCTGGAGAAGCGTT
AY310861 ---------
DQ822830 TCCGTGCTG
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