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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310858: Comparing with sequences in the identified database
Accession number: AY310858 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM395 internal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: KF000455 Genbank entry
Species annotation of this match: Sebacina cystidiata ToL?
Annotation of this match: Sebacina cystidiata voucher TUB 020027 18S ribosomal RNA gene,
BLAST E-value and score of this match (against AY310858): 1e-117, 422
Source publication: Oberwinkler,F., Riess,K., Bauer,R. and Garnica,S. Morphology and molecules: the Sebacinales, a case study Mycol. Prog. (2014) In press REMARK Publication Status: Available-Online prior to print
Date of inclusion of this match: 2014-11-11
Previous best BLAST match: AJ966750 Genbank entry
Species annotation of previous best BLAST match: Sebacina helvelloides ToL?
Annotation of this match: Sebacina helvelloides 5.8S rRNA gene, ITS1 and ITS2, isolate L104.
BLAST E-value and score of this match (against AY310858): 1e-110, 398
Source publication: Tedersoo,L., Suvi,T., Larsson,E. and Koljalg,U. Diversity and community structure of ectomycorrhizal fungi in a wooded meadow Mycol. Res. 110 (PT 6), 734-748 (2006)
Date of inclusion of this match: 2010-08-18
Alignment
Below is the alignment of the insufficiently identified sequence (AY310858) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 90.3576982892691 Length: 1269 bp. Number of gaps: 2173
KF000455 AGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAGTG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 ATTTTGAATCGTTGCCTTCAGTGCTGGCTCCTGAGCAAGTGCACGTTGGTGACTTTCAT-
AJ966750 --------------CCTTCTGTGCTGGCTCC--GGCAAGTGCACGTTGGTGACTTTCATT
AY310858 ------------------------------------------------------------
KF000455 -CCATTACCCT-GTGCACCTTTGGCCTCTTGTTGGCTTCGGCTGACGGAGGATTTTACAC
AJ966750 CCCAACACCCTTGTGAACCTTTGGCCTCTTGCTAGCCTCGGCTGGCAGAGGATTT-ACAC
AY310858 ------------------------------------------------------------
KF000455 ATAAACTCGAATGTAATGAAAA--CTACTGTCGTGCGCAAGCACTAATGTACAACTTTCA
AJ966750 ACAGACTCGAATGTAATGAAAAACCTCTTGTTGTGCGCAAGCACGAATGTACAACTTTCA
AY310858 ----------------CAGAAAGAACTTGTCTGTGCGCAAGCACNAATGTACAACTTTCA
*** ************ ***************
KF000455 ACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGT
AJ966750 ACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGT
AY310858 ACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGT
************************************************************
KF000455 GAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTTTGGTATTC
AJ966750 GAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTTTGGTATTC
AY310858 GAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCATTGGTATTC
************************************************** *********
KF000455 CGAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTCCCTAAT-GGCTTGCATTA
AJ966750 CGAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTTCTAATTCGTTTTGGATTA
AY310858 CAAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTCC--AAT---------CTT
* *************************************** * * * *
KF000455 GGAGTGGTGGACTTGGGTGTTGCTGCTTCA-CGGTGGCTCACCTGAAATGCATTAGTGCA
AJ966750 GGAGCGGTGGACTTGGGTGTTGCTGCTTTAGTTGTGGCTCACCTCAAATGAGTTAGTACA
AY310858 GGAGAAGTGGACTTGGGTGTTGCTGCTTTG-CTGTGGCTCATCTTAAATATGCTAGTGCA
**** ********************** ******** ** **** **** **
KF000455 CCTCCTGGTTGGACATAGTACGGCGTGATAAGTGTCTTCGCCGGCGCCTCG----AAAGA
AJ966750 ACTCTTGGTTGGACATAGTACGGCGTGATAAGTGTCTTCGCCGGCGCCTCCTCACAAGGA
AY310858 ACTCATGGTTGGATATAGTACAGCGTGATAAGTATCTTCGCTGGCGCCTCCT---AAAGA
*** ******** ******* *********** ******* ******** ** **
KF000455 GGGTGGCCGATTGGGAGCTCTGGGCTTCTAACTGTCTT----AGGACACTCTCTGACAAC
AJ966750 GGGTGGCCGATCGGGAGCTCTGTGCTTCAAACCGTCTT----CGGACAATNTCTGACAAC
AY310858 GGGTGTCTGATTGGGAGCTCTGTGCTTCAAACTGTCCTGTCTAGGACAATCTCTGACAAC
***** * *** ********** ***** *** *** * ***** * *********
KF000455 TTGACCTCAAATCGAGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAA
AJ966750 ------------------------------------------------------------
AY310858 TTGGCCTCAAA-------------------------------------------------
KF000455 AGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGAGGGAAGAGCTCAAATTTTGA
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 ATCTGGCGTCTTTGGCGTCCGAATTGTAATCTAGAGAAGTGTTTTCCGTAATGGACCGTG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CACAAGTCTCCTGGAATGGAGCGTCATAGAGGGTGAGAATCCCGTATATGGCACGGACTA
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CCGTTGCTCTGTGATACACTCTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 GTGGTAAATGCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 AGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 GAAACGCTTGAAGTCAGTCGCGCCGTTCGGGATTCAGCCTTGCTTCTGCTTGGTTTACTT
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CCCGTTGGGTGGGTCAACATCAGTTTTGGTCGGAGGAGAAAGGCCCGTGGAAGGTAGCAG
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CTTTGCTGTGTTATAGCCACTTGTTGTATACTTCGACTGGGACTGAGGATCGCAGCACGC
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CTTTGGCCGGGGCTTTGCCCACGTACGTGCTTAGGATGTTGGCATAATGGCTTTAAGCGA
AJ966750 ------------------------------------------------------------
AY310858 ------------------------------------------------------------
KF000455 CCCGTCTTG
AJ966750 ---------
AY310858 ---------
Accession AY310858: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: EF417823 Genbank entry
Species annotation of this match: uncultured Sebacinales
Annotation of this match: Uncultured Sebacinales clone L5CD5 18S ribosomal RNA gene, partial
BLAST E-value and of this match (against AY310858): 0.0, 716
Source publication: Morris,M.H., Smith,M.E., Rizzo,D.M., Rejmanek,M. and Bledsoe,C.S. Contrasting ectomycorrhizal fungal communities on the roots of co-occurring oaks (Quercus spp.) in a California woodland New Phytol. 178 (1), 167-176 (2008)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310858) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 97.9949874686717 Length: 1114 bp. Number of gaps: 1513
AY310858 ------------------------------------------------------------
EF417823 AGGATCATTATTGATTTTGATTTGTTACCTTCTGTGCTGGCTCCGGCATGTGCACGTTGG
AY310858 ------------------------------------------------------------
EF417823 TGACTTTCATGCAATCCCCTTTTGTGAACCTTTGGCCTCATGCTGGCTTTGGCCGGCAGA
AY310858 -------------------------CAGAAAGAACTTGTCTGTGCGCAAGCACNAATGTA
EF417823 GGATTTTACACAAACTTGAATGTAACAGAAAAAACTTGT-TGTGCGCAAGCACTAATGTA
****** ******* ************* ******
AY310858 CAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGAT
EF417823 CAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGAT
************************************************************
AY310858 AAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCA
EF417823 AAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCA
************************************************************
AY310858 TTGGTATTCCAAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTCCAATCTTGG
EF417823 TTGGTACTCCAAAGGGTATGCTCGTTTGAGTGTCATTGTACTCTCACACTCCAATCTTGG
****** *****************************************************
AY310858 AGAAGTGGACTTGGGTGTTGCTGCTTTGCTGTGGCTCATCTTAAATATGCTAGTGCAACT
EF417823 AGAAGTGGACTTGGGTGTTGCCGCTTTGCTGTGGCTCATCTTAAATATGCTAGTGCAACT
********************* **************************************
AY310858 CATGGTTGGATATAGTACAGCGTGATAAGTATCTTCGCTGGCGCCTCCTAAAGAGGGTGT
EF417823 CATGGTTGGATATAGTACAGCGTGATAAGTATCTTCGCTGGCGCCTCATGAAGAGGGTGT
*********************************************** * **********
AY310858 CTGATTGGGAGCTCTGTGCTTCAAACTGTCCTGTCTAGGACAATCTCTGACAACTTGGCC
EF417823 CTGATCGGGAGCTCTGTGCTTCAAACTGTCCTGTCTGGGACAATCTCTGACAACTTGGCC
***** ****************************** ***********************
AY310858 TCAAA-------------------------------------------------------
EF417823 TCAAATCGAGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAAC
*****
AY310858 ------------------------------------------------------------
EF417823 TAACAAGGATTCCCCTAGTAACGGCGAGTGAAGAGGGAAGAGCTCAAATTTTGAATCTGG
AY310858 ------------------------------------------------------------
EF417823 CACCTTTGGTGTCTGAGTTGTAATCTAGAGAAGCGCTGTCTGTGGCGGACCGTGCACAAG
AY310858 ------------------------------------------------------------
EF417823 TCTCCTGGAATGGAGCATCATAGAGGGTGAGAATCCCGTATATGGCATGGACTCCCGTTG
AY310858 ------------------------------------------------------------
EF417823 CTCTGTGACACACTCTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCCAAATGGGTGGTA
AY310858 ------------------------------------------------------------
EF417823 AATGCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAA
AY310858 ------------------------------------------------------------
EF417823 AGATGAAAAGCACTTTGGAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAACA
AY310858 ------------------------------------------------------------
EF417823 CTTGAAGTCAGTCATGCCCTTTGGGATTCGGCCTTGCTTCTGCTTGGTTTACTTCCTGTT
AY310858 ------------------------------------------------------------
EF417823 GGGTGGGTCAACATCAGTTTCAGTCAGAGGAGAAAGGCTTGGGGAAGGTGGCAGCATTAC
AY310858 ----------------------------------
EF417823 GCTGTGTTATAGCCCCTTGTTGTATACTTTGACC
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