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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310854: Comparing with sequences in the identified database
Accession number: AY310854 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM2049 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: AY061684 Genbank entry
Species annotation of this match: Russula integriformis ToL?
Annotation of this match: Russula integriformis 561IS78 18S ribosomal RNA gene, partial
BLAST E-value and score of this match (against AY310854): 0.0, 1102
Source publication: Miller,S.L. and Buyck,B. Molecular phylogeny of the genus Russula in Europe with a comparison of modern infrageneric classifications Mycol. Res. 106 (3), 259-276 (2002)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310854) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 98.7654320987654 Length: 727 bp. Number of gaps: 1375
AY310854 -------------------------------------------CATTATTGTATAACCGA
AY061684 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTATAACCGA
*****************
AY310854 GGTGGCAAGGGCTGTCGCTGACCTTTCAAAGGTTGTGCACGCCCAAGCACGCTCTCACAC
AY061684 GGTGGCAAGGGCTGTCGCTGACCTTTCAAAGGTTGTGCACGCCCAAGCACACTCTCACAC
************************************************** *********
AY310854 ATCCATCTCACCCCTTTTGTGCATCACCGCGTAGGCCCTCCCTTTGCAAGGAGGGCTTGC
AY061684 ATCCATCTCACCCCTTTTGTGCATCACCGCGTAGGCCCTCCCTTTGCAAGGAGGGCTTGC
************************************************************
AY310854 GTTTTCACATAAAAACTTTTGATACAGTATAGAATGTTCTTTTTTATTTTGCGGTCACAC
AY061684 GTTTTCACATAAAAACTTTTGATACAGTATAGAATGTTCCTTTTTATTTTGCGGTCAAAC
*************************************** ***************** **
AY310854 GCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGC
AY061684 GCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGC
************************************************************
AY310854 GAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCAC
AY061684 GAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCAC
************************************************************
AY310854 CTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAAA
AY061684 CTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAAA
************************************************************
AY310854 CCCTTTTTCTTTGAAAAGGATTTTTGGACTTGGAGGTTCCATGCTTGCCTTTGCCTTTGA
AY061684 CCCTTTTTCTTTGAAAAGGATTTTTGAACTTGGAGGTTCCATGCTTGC------CTTTGA
************************** ********************* ******
AY310854 AGGTGAGCTCCTCTCAAATAAATTAGTGGGGTCCGCTTTGCTGATCCTTAATGTGATAAG
AY061684 AGGTGAGCTCCTCTCAAATAAATTAGTGGGGTCCGCTTTGCTGATCCTTAATGTGATAAG
************************************************************
AY310854 ATGTTTCTACATTTTGGATTTAAACCACTGTCCCTTGGATGCCTGCTCCTAACTGTCTTT
AY061684 ATGTTTCTACATTTTGGATTTAG--CACTGTCCCTTGGATGCCTGCTCCTAACTGTCTTT
********************** ***********************************
AY310854 TGGACNAATGATGGTGCTCCGGTCATCGCCATCTACATTGGCGAGAGGCTGGACCCACAA
AY061684 TGGACAA-TGATGGTGCTCCGGTCATCGCCATCTACATTGGCAAAAGGCTGGACCCACAA
***** * ********************************** * ***************
AY310854 AAAAAAACCTTGACCTCAAATCGGGTGAGACTACCCGCTGA-------------------
AY061684 AAAAAA-CCTTGACCTCAAATCGGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAG
****** **********************************
AY310854 -------
AY061684 CGGAGGA
Accession AY310854: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: EU668264 Genbank entry
Species annotation of this match: uncultured Russula
Annotation of this match: Uncultured Russula isolate A.7070 18S ribosomal RNA gene, partial
BLAST E-value and of this match (against AY310854): 0.0, 1166
Source publication: Bidartondo,M.I. and Read,D.J. Fungal specificity bottlenecks during orchid germination and development Mol. Ecol. 17 (16), (2008)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310854) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.5176848874598 Length: 671 bp. Number of gaps: 1293
AY310854 -------------CATTATTGTATAACCGAGGTGGCAAGGGCTGTCGCTGACCTTTCAAA
EU668264 CCTGCGGAAGGATCATTATTGTATAACCGAGGTGGCAAGGGCTGTCGCTGACCTTTCAAA
***********************************************
AY310854 GGTTGTGCACGCCCAAGCACGCTCTCACACATCCATCTCACCCCTTTTGTGCATCACCGC
EU668264 GGTTGTGCACGCCCAAGCACACTCTCACACATCCATCTCACCCCTTTTGTGCATCACCGC
******************** ***************************************
AY310854 GTAGGCCCTCCCTTTGCAAGGAGGGCTTGCGTTTTCACATAAAAACTTTTGATACAGTAT
EU668264 GTAGGCCCTCCCTTTGCAAGGAGGGCTTGCGTTTTCACATAAAAACTTTTGATACAGTAT
************************************************************
AY310854 AGAATGTTCTTTTTTATTTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCT
EU668264 AGAATGTTCTTTTTTATTTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCT
************************************************************
AY310854 CTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAA
EU668264 CTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAA
************************************************************
AY310854 TTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACA
EU668264 TTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACA
************************************************************
AY310854 CCCGTTTGAGTGTCGTGAAATCATCAAAAACCCTTTTTCTTTGAAAAGGATTTTTGGACT
EU668264 CCCGTTTGAGTGTCGTGAAATCATCAAAAACCCTTTTTCTTTGAAAAGGATTTTTGGACT
************************************************************
AY310854 TGGAGGTTCCATGCTTGCCTTTGCCTTTGAAGGTGAGCTCCTCTCAAATAAATTAGTGGG
EU668264 TGGAGGTTCCATGCTTGCCTTTGCCTTTGAAGGTGAGCTCCTCTCAAATAAATTAGTGGG
************************************************************
AY310854 GTCCGCTTTGCTGATCCTTAATGTGATAAGATGTTTCTACATTTTGGATTTAAACCACTG
EU668264 GTCCGCTTTGCTGATCCTTAATGTGATAAGATGTTTCTACATTTTGGATTTAG--CACTG
**************************************************** *****
AY310854 TCCCTTGGATGCCTGCTCCTAACTGTCTTTTGGACNAATGATGGTGCTCCGGTCATCGCC
EU668264 TCCCTTGGATGCCTGCTCCTAACTGTCTTTTGGACAA-TGATGGTGCTCCGGTCATCGCC
*********************************** * **********************
AY310854 ATCTACATTGGCGAGAGGCTGGACCCACAAAAAAAAACCTTGACCTCAAATCGGGTGAGA
EU668264 ATCTACATTGGCGAGAGGCTGGACCCACAAAAAAAAAC----------------------
**************************************
AY310854 CTACCCGCTGA
EU668264 -----------
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