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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310849: Comparing with sequences in the identified database
Accession number: AY310849 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM2096 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: AF058314 Genbank entry
Species annotation of this match: Rhizopogon parksii ToL?
Annotation of this match: Rhizopogon parksii internal transcribed spacer 1, 5.8S ribosomal
BLAST E-value and score of this match (against AY310849): 0.0, 1120
Source publication: Grubisha,L.C., Trappe,J.M., Molina,R. and Spatafora,J.W. Biology of the ectomycorrhizal genus, Rhizopogon VI. Re-examination of infrageneric relationships inferred from phylogenetic analyses of internal transcribed spacer sequences Mycologia 94, 607-619 (2002)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310849) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.8239436619718 Length: 655 bp. Number of gaps: 1223
AY310849 ------------------CATTAACGAATATAAATCGGAAAGCTGTCGCTGGCCCTCGCG
AF058314 GTGAACCTGCGGAAGGATCATTAACGAATATAAATCGGAAAGCTGTCGCTGGCCCTCGCG
******************************************
AY310849 GGCATGTGCACGCTGACCGTGTTTCATAAATTTCTCACCTGTGAACCTAATGTAGGATGC
AF058314 GGCATGTGCACGCTGACCGTGTTTCATAAATTTCTCACCTGTGAACCTAATGTAGGATGC
************************************************************
AY310849 CCCTCCTCCGGGAGGGGGGACCTATGTCTTCATATACATCTTCGTGTAGAAAGTCTTAGA
AF058314 CCCTCCTCCGGGAGGGGGGACCTATGTCTTCATATACATCTTCGTGTAGAAAGTCTTAGA
************************************************************
AY310849 ATGTTTACTATCAGAGAGTCGCGACTTCTAGGAGACNCGAATCTTTGAGATAAAAGTTAT
AF058314 ATGTTTACTATCAGAGAGTCGCGACTTCTAGGAGACGCGAATCTTTGAGATAAAAGTTAT
************************************ ***********************
AY310849 TACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAAGCG
AF058314 TACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAAAGCG
************************************************************
AY310849 ATATGTAATGTGAATTGCAGATCTACAGTGAATCATCGAATCTTTGAACGCACCTTGCGC
AF058314 ATATGTAATGTGAATTGCAGATCTACAGTGAATCATCGAATCTTTGAACGCACCTTGCGC
************************************************************
AY310849 TCCTCGGTGTTCCGAGGAGCATGCCTGTTTGAGTGTCAGTAAATTCTCAACCCCTCTTGA
AF058314 TCCTCGGTGTTCCGAGGAGCATGCCTGTTTGAGTGTCAGTAAATTCTCAACCCCTCTTGA
************************************************************
AY310849 TTGAGGGAGTTTGGATAGTGGGGGCTGCCGGAGACTTGGATTCGTCTAGGACTCGGGCTC
AF058314 TTGAGGGAGTTTGGATAGTGGGGGCTGCCGGAGACTTGGATTCGTCTAGGACTCGGGCTC
************************************************************
AY310849 TCCTGAAATGCATCGGCTTGCGGTCGACTTTCGACTATGCGCGACAAGGCTTTCGGCGTG
AF058314 TCCTGAAATGCATCGGCTTGCGGTCGACTTTCGACTATGCGCGACAAGGCTTTCGGCGTG
************************************************************
AY310849 ATAATGATCGCCGTTCGCTGAAGTGCATGAATGAAAGTTTCGCGCC--------------
AF058314 ATAATGATCGCCGTTCGCTGAAGTGCATGAATGAAAGTTTCGCGCCTCTAATACGTCGAC
**********************************************
AY310849 -------------------------------------------------------
AF058314 TCTTATTATCTCTTCGGAGAGAAAAGGTCTTCTTCATTGACTTTTGACCTCAAAT
Accession AY310849: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: EU645618 Genbank entry
Species annotation of this match: uncultured ectomycorrhiza (Rhizopogon)
Annotation of this match: Uncultured ectomycorrhiza (Rhizopogon) clone STIL2RO9 18S
BLAST E-value and of this match (against AY310849): 0.0, 1114
Source publication: Outerbridge,R.A. and Trofymow,J.A. How do different levels of green tree retention affect the survival of ectomycorrhizae on southern coast of British Columbia Unpublished
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310849) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.6478873239437 Length: 784 bp. Number of gaps: 1352
AY310849 ------------------------------CATTAACGAATATAAATCGGAAAGCTGTCG
EU645618 AGGTTTCCGTAGGTGAACNTGCGGAAGGATCATTAACGAATATAAATCGGAAAGCTGTCG
******************************
AY310849 CTGGCCCTCGCGGGCATGTGCACGCTGACCGTGTTTCATAAATTTCTCACCTGTGAACCT
EU645618 CTGGCCCTCGCGGGCATGTGCACGCTGACCGTGTTTCATAAATTTCTCNCCTGTGAACCT
************************************************ ***********
AY310849 AATGTAGGATGCCCCTCCTCCGGGAGGGGGGACCTATGTCTTCATATACATCTTCGTGTA
EU645618 AATGTAGGATGCCCCTCCTCCGGGAGGGGGGACCTATGTCTTCATATACATCTTCGTGTA
************************************************************
AY310849 GAAAGTCTTAGAATGTTTACTATCAGAGAGTCGCGACTTCTAGGAGACNCGAATCTTTGA
EU645618 GAAAGTCTTAGAATGTTTACTATCAGAGAGTCGCGACTTCTAGGAGACGCGAATCTTTGA
************************************************ ***********
AY310849 GATAAAAGTTATTACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACG
EU645618 GATAAAAGTTATTACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACG
************************************************************
AY310849 CAGCGAAAAGCGATATGTAATGTGAATTGCAGATCTACAGTGAATCATCGAATCTTTGAA
EU645618 CAGCGAAAAGCGATATGTAATGTGAATTGCAGATCTACAGTGAATCATCGAATCTTTGAA
************************************************************
AY310849 CGCACCTTGCGCTCCTCGGTGTTCCGAGGAGCATGCCTGTTTGAGTGTCAGTAAATTCTC
EU645618 CGCACCTTGCGCTCCTCGGTGTTCCGAGGAGCATGCCTGTTTGAGTGTCAGTAAATTCTC
************************************************************
AY310849 AACCCCTCTTGATTGAGGGAGTTTGGATAGTGGGGGCTGCCGGAGACTTGGATTCGTCTA
EU645618 AACCCCTCTTGATTGAGGGAGTTTGGATAGTGGGGGCTGCCGGAGACTTGGATTCGTCTA
************************************************************
AY310849 GGACTCGGGCTCTCCTGAAATGCATCGGCTTGCGGTCGACTTTCGACTATGCGCGACAAG
EU645618 GGACTCGGGCTCTCCTGAAATGCATCGGCTTGCGGTCGACTTTCGACTATGCGCGACAAG
************************************************************
AY310849 GCTTTCGGCGTGATAATGATCGCCGTTCGCTGAAGTGCATGAATGAAAGTTTCGCGCC--
EU645618 GCTTTCGGCGTGATAATGATCGCCGTTCGCTGAAGTGCATGAATGAAAGTTTCGCGCCTC
**********************************************************
AY310849 ------------------------------------------------------------
EU645618 TAATACGTCGACTCTTATTATCTCTTCGGAGAGAAAAGGTCTTCTTCATTGACTTTTGAC
AY310849 ------------------------------------------------------------
EU645618 CTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAA
AY310849 ------------------------------------------------------------
EU645618 CTAACAAGGATTCCCCTAGTAACTGCGAGTGAACCGGGAAAAGCTCANTTTTGAATCTGG
AY310849 ----
EU645618 CGGT
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