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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310846: Comparing with sequences in the identified database
Accession number: AY310846 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM2048 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: KF717585 Genbank entry
Species annotation of this match: Otidea tuomikoskii ToL?
Annotation of this match: Otidea tuomikoskii voucher H6002901 18S ribosomal RNA gene, partial
BLAST E-value and score of this match (against AY310846): 0.0, 1021
Source publication: Olariaga,I. and Hansen,K. A world monograph of Otidea (Pyronemataceae, Ascomycota) Unpublished
Date of inclusion of this match: 2014-11-03
Previous best BLAST match: JN942777 Genbank entry
Species annotation of previous best BLAST match: Otidea tuomikoskii ToL?
Annotation of this match: Otidea tuomikoskii voucher S:NV 102 internal transcribed spacer 1,
BLAST E-value and score of this match (against AY310846): 0.0, 997
Source publication: Hansen,K. and Olariaga,I. The internal transcribed spacer as a universal DNA barcode marker for Fungi Unpublished
Date of inclusion of this match: 2012-02-23
Alignment
Below is the alignment of the insufficiently identified sequence (AY310846) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 97.45 Length: 625 bp. Number of gaps: 1798
AY310846 ---------------------------------------CATTAAAAGAATATGTACTAA
KF717585 GTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAAAGAATCTGTACTAA
JN942777 ----------------------TGAACCTGCGGAAGGATCATTAAAAGAATATGTACTAA
************ ********
AY310846 GCTTGGTCACAAGCCTAGACTTACAATTCTAACACATTCTGCGTACCATTCCTGTTGCTT
KF717585 GCTTGGTTACAAGCCTAGACTTACAATTCTAACACATTCTGCGTACCATTCCTGTTGCTT
JN942777 GCTTGGTCACAAGCCTAGACTTGCAATTCTAACACATTCCGCGTACCATTCCTGTTGCTT
******* ************** **************** ********************
AY310846 CCGTGGGGTATGGAGCTGTCCTGGACAGCTTCGGCCGGCCAGCAGGCTGGTTCCCACGGG
KF717585 CCGTGGGGTGTGGAGCTGTCCTGCACAGCTTCGGCTGGCCAGTGGGCTGGTTCCCACGGG
JN942777 CCGTGGGGTATGGAGCTGTCCTGGACAGCTTCGGCCGGTCAGTGGGCTGGTTCCCACGGG
********* ************* *********** ** *** ****************
AY310846 AGGTATTCTACAAACCATTTGTATATATTTGCCTTCTGTCTGAATTATGTTAATAACAAT
KF717585 AGGTATTCTACAAACCATTTGTATTTATTTGCCTTCTGTCTGAATCATGTTAATAACAAT
JN942777 AGGTATTCTACACACCATTTGTATTTATTTGCCTTCTGTCTGAATCATGTTAATAACAAT
************ *********** ******************** **************
AY310846 TGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT
KF717585 TGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT
JN942777 TGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAAT
************************************************************
AY310846 GCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGC
KF717585 GCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGC
JN942777 GCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGC
************************************************************
AY310846 GCCTCCTGGCATTCCGGGAGGCATGCCTGTTCGAGCGTCATGAAGACCATTTCAAGCTCT
KF717585 GCCTCCTGGCATTCCGGGAGGCATGCCTGTTCGAGCGTCATGAAGACCATTTCAAGCTTT
JN942777 GCCTCCTGGCATTCCGGGAGGCATGCCTGTTCGAGCGTCATGAAGACCATTTCAAGCTCT
********************************************************** *
AY310846 TTTGCTTGGTTGTGGAGGTTGAGCGTTGCCCGCGTGCTCGTTCCCCTTTGAAATTTGCTG
KF717585 TTTGCTTGGTTTTGGAGGTTGAGCGTTGCCCGTGTGCTCGTTCCCCTTTGAAATTTGCTG
JN942777 TTTGCTTGGTTGTGGAGGCTGAGCGTTGCCAACGTGCTCGCTCCCCTTTGAAATTTGCTG
*********** ****** *********** ******* *******************
AY310846 GCGGATCGCTCCATGTTCCATTTGGCGTTATAGGATAACTCTTTCGCTTGGACTCATGAG
KF717585 GCGGACTGCTCCATGTTCCATTTGGCGTTATAGGATAACTCTTTCGCTTGGACTCATGAG
JN942777 GCGGACTGCTCCATGTTCCATTTGGCGTTATAGGATAACTCTTTCGCTTGGACTCATGAG
***** *****************************************************
AY310846 GCTGTCCTGCCCAATAACCCCCAATTAATCTGACGTTGACCTCGGATCAGGTAGGGATAC
KF717585 GCTGTCCTGCCCAATAACCCCCAATTAATCTGACGTTGACCTCGGATCAGGTAGGGATAC
JN942777 GCTGTCCTGTCCAATAACCCCCAATCAATTTGACGTTGACCTCGGATCAGGTAGGGATAC
********* *************** *** ******************************
AY310846 CCGCTGAACT---------------
KF717585 CCGCTGAACTTAAGCATATCAATC-
JN942777 CCGCTGAACTTAAGCATATCAATAA
**********
Accession AY310846: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: FM992944 Genbank entry
Species annotation of this match: uncultured Pezizales
Annotation of this match: Uncultured ectomycorrhiza (Pezizales) 18S rRNA gene (partial),
BLAST E-value and of this match (against AY310846): 0.0, 965
Source publication: Kjoller,R. and Clemmensen,K.E. Belowground ectomycorrhizal fungal communities respond to liming in three southern Swedish coniferous forest stands For. Ecol. Manage. 257 (11), (2009)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310846) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 96.6666666666667 Length: 588 bp. Number of gaps: 1158
AY310846 ---CATTAAAAGAATATGTACTAAGCTTGGTCACAAGCCTAGACTTACAATTCTAACACA
FM992944 GATCATTAAAAGAATATGTACTAAGCTTGGTCACAAGCCTAGA-TTGCAATTCTAACACA
**************************************** ** *************
AY310846 TTCTGCGTACCATTCCTGTTGCTTCCGTGGGGTATGGAGCTGTCCTGGACAGCTTCGGCC
FM992944 TTCCGCGTACCATTCCTGTTGCTTCCGTGGGGTATGGAGCTGTCCTGGACAGCTTCGGCC
*** ********************************************************
AY310846 GGCCAGCAGGCTGGTTCCCACGGGAGGTATTCTACAAACCATTTGTATATATTTGCCTTC
FM992944 GGTCACTGGGCTGGTTCCCACGGGAGGTATTCTACAAACCATTTGTATTTATTTGCCTTC
** ** **************************************** ***********
AY310846 TGTCTGAATTATGTTAATAACAATTGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCG
FM992944 TGTCTGAATCATGTTAATAACAATTGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCG
********* **************************************************
AY310846 CATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATC
FM992944 CATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATC
************************************************************
AY310846 ATCGAATCTTTGAACGCACATTGCGCCTCCTGGCATTCCGGGAGGCATGCCTGTTCGAGC
FM992944 ATCGAATCTTTGAACGCACATTGCGCCTCCTGGCATTCCGGGAGGCATGCCTGTTCGAGC
************************************************************
AY310846 GTCATGAAGACCATTTCAAGCTCTTTTGCTTGGTTGTGGAGGTTGAGCGTTGCCCGCGTG
FM992944 GTCATGAAGACCATTTCAAGCTCTTTTGCTTGGTTGTGGAGGCTGAGCGTTGCCAACGTG
****************************************** *********** ****
AY310846 CTCGTTCCCCTTTGAAATTTGCTGGCGGATCGCTCCATGTTCCATTTGGCGTTATAGGAT
FM992944 CTCGCTCCCCTTTGAAATTTGCTGGCGGACTGCTTCGGGTTCCATTTGGCGTTATAGGAT
**** ************************ *** * **********************
AY310846 AACTCTTTCGCTTGGACTCATGAGGCTGTCCTGCCCAATAACCCCCAATTAATCTGACGT
FM992944 AACTCTTTCGCTTGGACTCATGAGGCTGTCCTGCCCAATAACCCCCAATCAATTTGACGT
************************************************* *** ******
AY310846 TGACCTCGGATCAGGTAGGGATACCCGCTGAACT--------------
FM992944 TGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATA
**********************************
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