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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310836: Comparing with sequences in the identified database
Accession number: AY310836 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM209 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: JQ638713 Genbank entry
Species annotation of this match: Membranomyces spurius ToL?
Annotation of this match: Membranomyces spurius voucher H6025454 internal transcribed spacer
BLAST E-value and score of this match (against AY310836): 0.0, 862
Source publication: Uehling,J.K., Henkel,T.W., Vilgalys,R. and Smith,M.E. Membranomyces species are common ectomycorrhizal symbionts in Northern Hemisphere forests Mycorrhiza 22 (7), 577-581 (2012)
Date of inclusion of this match: 2014-10-24
Previous best BLAST match: JN228221 Genbank entry
Species annotation of previous best BLAST match: Clavulina subrugosa ToL?
Annotation of this match: Clavulina subrugosa 18S ribosomal RNA gene, partial sequence;
BLAST E-value and score of this match (against AY310836): 1e-111, 400
Source publication: Uehling,J.K., Henkel,T.W., Aime,M.C., Vilgalys,R. and Smith,M.E. New species of Clavulina (Cantharellales, Basidiomycota) with resupinate and effused basidiomata from the Guiana Shield Mycologia 104 (2), 547-556 (2012)
Date of inclusion of this match: 2012-02-23
Alignment
Below is the alignment of the insufficiently identified sequence (AY310836) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 89.8264512268103 Length: 1342 bp. Number of gaps: 2484
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 CTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAG
AY310836 ---CATTAACGAATTGTAATTGGAGTTGATGCTGGCAGGC-----TTGGCTGCATGTGCT
JQ638713 --------ATGAATTGTAATTGGAGTTGATGCTGGCAG--------TGGCTGCATGTGCT
JN228221 GATCATTAATGAGTTGTGATAAGGTTTGATGCTGGCAGCCAATTTTTGGATGCATGTGCT
* ** **** ** * ************* *** **********
AY310836 CGCTCCTAACAATCTTCATCCAAACACCTGTGCACA-TTTAGAGAGGGTCTCCGA-----
JQ638713 CGCTCCTAACAATCTTCATCCAAACACCTGTGCACA-TTTAGAGAGGGTCTCCGA-----
JN228221 CGC-CTTAACAATCATTTTCCAAACACCCGTGCACACTTTTGAGGGAGTTTTGAGCCTAT
*** * ******** * ********** ******* *** *** * ** *
AY310836 -GTCCTCCTTGGAG------TCCCTTCCTCT-------CATTACACACTTTATTTCAATG
JQ638713 -GTTCTCCTTGGAG------TCCCTTCCTCT-------CATTATACACTAGTTTTTAATA
JN228221 TGTCACTCTTGGTGATTTGCTCGCATTCCCTTTAAATCCATTATACGCT-GTTAACAATA
** ***** * ** * * * ** ***** ** ** * ***
AY310836 TTGAACGTGAT-TGTGCCGTAAGGCC-TTAATATTAATACAACTTTTAACAACGGATCTC
JQ638713 TTGAACGTGAT-TGTGCCGTGAGGCC-TTAATATTAATACAACTTTTAACAACGGATCTC
JN228221 CTGAACGTGTTCTGTGCCGCAAGGCCATTAATAT-AATACAACTTTTAACAACGGATCTC
******** * ******* ***** ******* *************************
AY310836 TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAAT
JQ638713 TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAAT
JN228221 TTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAAT
************************************************************
AY310836 TCAGTGAATCATCAAATTTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGC
JQ638713 TCAGTGAATCATCGAATTTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGC
JN228221 TCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGC
************* *** ******************************************
AY310836 CTGTTCGAGTGTCGTGAAATTC-TCAAACCGGGATGCTTTTTTTGTTTCTC-----GGCT
JQ638713 CTGTTCGAGTGTCGTAAAATTC-TCAAACTGGGATGCTTTTTT-GTTTCTC-----GGCT
JN228221 CTGTTCGAGTGTCACGAAATTTGTCAAGCTTGGATGGCCTTTTTGTCTGTCCATTAGCCT
************* ***** **** * ***** **** ** * ** * **
AY310836 TGGT-GTTGGGCTTTGCAGTTCCTTTGATTGGGATGGCTGGCCTTAAAAGCATTAGCTGG
JQ638713 TGGT-GTTGGGCTTTGCAGTTCCTTTGATTGGGATAGCTGGCCTCAAAAGCATTAGCTGG
JN228221 TGGTTATTGGGCTTTGCCGTGTCCTTTATTGGGANGGCTGGCCTTAAAAGCATTAGCTGA
**** *********** ** * ** ******* ******** **************
AY310836 CTTTTCATGTGGCATTGGTTCTACTCAGCGTGATAATG-ATCTGACCGCTGAGGACATCT
JQ638713 CTTTTCATGTGGCATTGGTTCTACTCAGCGTGATAATG-ATCTGACCGCCGAGGACATCT
JN228221 -TCCTCGTGTGGCACTGGTTCTACTCAGCGTGATAATACATCTGATCGCTGAGGACATCT
* ** ******* ********************** ****** *** **********
AY310836 TTCGAGATGGCCAATTCTCATTTGGGCTGCTTCTAATTTTGGTAGAGCAGATTCTGAA--
JQ638713 TTCGGGATGGCCAATTCTCATTTGGGCTGCTTCTAATTTT--------------------
JN228221 TTCAGGATGGCCAGTTCTCATTTGGGTTGCTTCTAAACCTGGTTTNGCAGATTCTTGAAT
*** ******** ************ ********* *
AY310836 -TCTGTTCCACTTTTCAGCTTTTGACCTCGAATCAGGTGGGACTACCCGCTGAAC-----
JQ638713 ------------------------------------------------------------
JN228221 CTGTGTTCCACTTTTCAGCTTT-GACCTCGAATCAGGTGGGACTACCCGCTGAACTTAAG
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 CATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAG
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 CGGGAAGAGCTCAAATTTAAAATCTGGCAATCTTTGGTTGTCCGAGTTGTAATCTAGAGA
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 AGCGTTTTCCGTGCTGGACTGTGTACAAGTTTCCTGGATACGGAACATCATAGAGGGTGA
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 GAATCCCGTCCTTGACACAGACTCCCAGTGCTTTTGTGATGCGCTCTCGACGAGTCGAGT
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 TGTTTGGGATTGCAGCTCAAAATGGGAGGTAAATTCCTTCTAAAGCTAAATATTGGCGAG
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 AGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTTA
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 AACAGTACGTGAAATTGTTAAAAGGGAAACGCTTGAAGTCAGTCGCGTTTGCTTGGACTC
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 AGCCTAACTTCGGTTTGGTGCATTTCCTTGCAGACGGGCCAGCGTCCATGTCGTTCCCCG
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 GAAAAGGGGTGAGAGAATGTGGCTCCTTTGGGAGTGTTATAGCTTTCATTCGCATGCGGG
AY310836 ------------------------------------------------------------
JQ638713 ------------------------------------------------------------
JN228221 GAACAATATGGAGTGGTACAGCACACTTCGGTGGTGCTTGTGCTGGCATAATGGCTTTAA
AY310836 ----------------------
JQ638713 ----------------------
JN228221 ACGACCCGTCTTGAAACACGGA
Accession AY310836: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: DQ822799 Genbank entry
Species annotation of this match: uncultured Clavulinaceae
Annotation of this match: Uncultured Clavulinaceae type OTU: RT633 18S ribosomal RNA gene,
BLAST E-value and of this match (against AY310836): 0.0, 1158
Source publication: Peay,K.G., Bruns,T.D., Kennedy,P.G., Bergemann,S.E. and Garbelotto,M. A strong species-area relationship for eukaryotic soil microbes: island size matters for ectomycorrhizal fungi Ecol. Lett. 10 (6), 470-480 (2007)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310836) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.5114006514658 Length: 633 bp. Number of gaps: 1247
AY310836 --------------CATTAACGAATTGTAATTGGAGTTGATGCTGGCAGGCTTGGCTGCA
DQ822799 ACCTGCGGAAGGATCATTAACGAATTGTAATTGGAGTTGATGCTGGCAGGCTTGGCTGCA
**********************************************
AY310836 TGTGCTCGCTCCTAACAATCTTCATCCAAACACCTGTGCACATTTAGAGAGGGTCTCCGA
DQ822799 TGTGCTCGCTCCTAACAATCTTCATCCAAACACCTGTGCACATTTAGAGAGGGTCTCCGA
************************************************************
AY310836 GTCCTCCTTGGAGTCCCTTCCTCTCATTACACACTTTATTTCAATGTTGAACGTGATTGT
DQ822799 GTCCTCCTTGGAGTCCCTTCCTCTCATTACACACTTTATTTCAATGTTGAACGTGATTGT
************************************************************
AY310836 GCCGTAAGGCCTTAATATTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGA
DQ822799 GCCGTAAGGCCTTAATATTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGA
************************************************************
AY310836 TGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCAAA
DQ822799 TGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCAAA
************************************************************
AY310836 TTTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCGTG
DQ822799 TTTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCGTG
************************************************************
AY310836 AAATTCTCAAACCGGGATGCTTTTTTTGTTTCTCGGCTTGGTGTTGGGCTTTGCAGTTCC
DQ822799 AAATTCTCAAACCGGGATGCTTTTTTTGTTTCTCGGCTTGGTGTTGGGCTTTGCAGTTCC
************************************************************
AY310836 TTTGATTGGGATGGCTGGCCTTAAAAGCATTAGCTGGCTTTTCATGTGGCATTGGTTCTA
DQ822799 TTTGATTGGGATGGCTGGCCTTAAAAGCATTAGCTGGCTTTTCATGTGGCATTGGTTCTA
************************************************************
AY310836 CTCAGCGTGATAATGATCTGACCGCTGAGGACATCTTTCGAGATGGCCAATTCTCATTTG
DQ822799 CTCAGCGTGATAATGATCTGACCGCCGAGGACATCTTTCGAGGTGGCCAATTCTCATTTG
************************* **************** *****************
AY310836 GGCTGCTTCTAATTTTGGTAGAGCAGATTCTGAATCTGTTCCACTTTTCAGCTTTTGACC
DQ822799 GGCTGCTTCTAATTTTGGTAGAGCAGATTCTGAATCTGTTCCACTTTTCAGCTTTTGACC
************************************************************
AY310836 TCGAATCAGGTGGGACTACCCGCTGAAC-----
DQ822799 TCGAATCAGGTGGGACTACCCGCTGAAACTTAG
***************************
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