hard facts fast
Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310830: Comparing with sequences in the identified database
Accession number: AY310830 Genbank entry
Species annotation: uncultured ectomycorrhizal fungus
Annotation: Uncultured ectomycorrhizal fungus note PCR # TAM2066 18S ribosomal
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: JQ836559 Genbank entry
Species annotation of this match: Tricharina praecox var. praecox ToL?
Annotation of this match: Tricharina praecox var. praecox strain CBS 240.85 18S ribosomal RNA
BLAST E-value and score of this match (against AY310830): 1e-101, 369
Source publication: Yuan,Z.-L. Identification of an anamorphic species in Tricharina Unpublished
Date of inclusion of this match: 2012-09-28
Previous best BLAST match: EU669387 Genbank entry
Species annotation of previous best BLAST match: Pseudaleuria quinaultiana ToL?
Annotation of this match: Pseudaleuria quinaultiana isolate p713i 18S ribosomal RNA gene,
BLAST E-value and score of this match (against AY310830): 2e-89, 329
Source publication: Gordon,M. and Zych,P. Preservation of genetic information from rare macrofungi of the U.S. Pacific Northwest Unpublished
Date of inclusion of this match: 2010-08-18
Alignment
Below is the alignment of the insufficiently identified sequence (AY310830) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 82.360097323601 Length: 723 bp. Number of gaps: 1852
AY310830 -----------------------------------------------------CATTAAA
JQ836559 ------------------AAATAAGGCTTTTCGTATGTGACCTGCGGA-GGATCATTAAA
EU669387 TAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAAA
*******
AY310830 AGTAA-TATATATTCATTG--GAATATACATTTCAAACCCCT--TGTCTAAACTACCTGT
JQ836559 AGTAAATATGTATTCTCTG--GAATATACGTTTCAAACCCATC-TGTGTATCTTACCTGT
EU669387 AGATATAGCATATTCATTTATGAATGTACTTTATAAACCCATTCCGAGTACCTTACCCGT
** * ***** * **** *** ** ****** * * ** **** **
AY310830 TGCTTCCG-GCTGTTTGGGCT---GTATGGTTA-GCTGTATA------------------
JQ836559 TGCTTCCGTACCGCGTGGACTTCGGTCCCCTCATGCTGTACTTCGGTACGGTTCCAGAGT
EU669387 TGCTTCCGTGGGGCAGTGATTCACGTCACCTCTGAAGATGGCCTTGGTCATTGGAAGGGA
******** * * * ** * *
AY310830 GCCTGGCCGGAAGGTTGACATAAAA-TATTGTATT-TAGAGTCTTCTG----AAT-TGTT
JQ836559 GCCGGTGCGGAAGGTATACATCAAACTCTTGCATT-CCATGTCTTCTGTCTGAAC-TGTT
EU669387 GTCTCCGCGGGAGGTATACAATAAATTCTTGCATTACCATGTCATCTGTCTGAATCTGTT
* * *** **** *** *** * *** *** *** **** ** ****
AY310830 AA-AACAAAAGTTAAAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGGA
JQ836559 AATAACAAAAGTTTAAAA-CTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAA
EU669387 TATAACAAATGTTAAAA--CTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAA
* ****** *** *** *************************************** *
AY310830 CGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGA
JQ836559 CGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGA
EU669387 CGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGA
************************************************************
AY310830 ACGCACATTGCGCCTTCCGGTATTCCGGGAGGCATGCCTGTCCGAGCGTCATCAAAAACC
JQ836559 ACGCACATTGCGCCTCCTGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTAAAAACC
EU669387 ACGCACATTGCGCCTTCCGGTATTCCGGGAGGCATGCCTGTTCGAGCGTCATTAAAAACC
*************** * *********************** ********** *******
AY310830 ACTCAAGTAGTTTTGCTTGGTAATGAAAGAAGAGTTTGCTTGCGGAT-TCCCTTTCGAAA
JQ836559 ACTCAAGCTCTTTTGCTTGGTCATGGAAGAAGAGTCCGCTTGCCGGTCTCCCTTTCGAAA
EU669387 ACTCAAGCTCTTTTGCTTGGTCATGGAAGATGAGTGTGCTTTGTGCTCTCACTTCCGAAA
******* *********** *** **** **** **** * * ** *** *****
AY310830 TTCAATGGCGGAGAGTCTCATGATTCC-GGCGTAGTAATAACTTATTCGCTTGGT-CATT
JQ836559 TGCAATGGCGGAAGGTCTCTTGTACCC-AGCGTAGTAATAACTT-TTCGCTTTGTGCATT
EU669387 TTCAATGGCGGAAAGCCCCATGTGCCCCGGCGTAGTAAGTTTTCTTTCGCTTGGA-CTGT
* ********** * * * ** ** ********* * ******* * * *
AY310830 GTAACAATCCTGCC-CCAAATCCCCAATTCTAGT-GTTTGACCTCGGATCAGGTAGGGAT
JQ836559 GATTCATTCCTGCCGTCAAACCCCCAATTTTCTTAGGTTGACCTCGGATCAGGTAGGGAT
EU669387 GAGGTGATCCTGCC-ACAAACCCCCAATTTTTCTAGGTTGACCTCGGATCAGGTAGGGAT
* ******* **** ******** * * * ***********************
AY310830 ACCCGCTGAACT------------------------------------------------
JQ836559 ACCCGCTGAACTTAAGCATATCAATAGCGCAGGGAGGAGTCT------------------
EU669387 ACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTTA
************
AY310830 ------------------------------------------------------------
JQ836559 ------------------------------------------------------------
EU669387 GTAACTGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTCGGCGTCCGAG
AY310830 ---
JQ836559 ---
EU669387 TTG
Accession AY310830: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: DQ822806 Genbank entry
Species annotation of this match: uncultured Ascomycota
Annotation of this match: Uncultured Ascomycota type OTU: RT269 18S ribosomal RNA gene,
BLAST E-value and of this match (against AY310830): 0.0, 997
Source publication: Peay,K.G., Bruns,T.D., Kennedy,P.G., Bergemann,S.E. and Garbelotto,M. A strong species-area relationship for eukaryotic soil microbes: island size matters for ectomycorrhizal fungi Ecol. Lett. 10 (6), 470-480 (2007)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310830) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.8062015503876 Length: 538 bp. Number of gaps: 1054
AY310830 ---------------CATTAAAAGTAATATATATTCATTGGAATATACATTTCAAACCCC
DQ822806 AACCTGCGGAAGGATCATTAAAAGTAATATATATTCATTGGAATATACATTTCAAACCCC
*********************************************
AY310830 TTGTCTAAACTACCTGTTGCTTCCGGCTGTTTGGGCTGTATGGTTAGCTGTATAGCCTGG
DQ822806 TTGTCTAAACTACCTGTTGCTTCCGGCTGTTTGGGCTGTATGGTTAGCTGTATAGCCTGG
************************************************************
AY310830 CCGGAAGGTTGACATAAAATATTGTATTTAGAGTCTTCTGAATTGTTAAAACAAAAGTTA
DQ822806 CCGGAAGGTTGACATAAAATATTGTATTTAGAGTCTTCTGAATTGTTAAAACAAAAGTTA
************************************************************
AY310830 AAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGGACGCAGCGAAATGCG
DQ822806 AA--ACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCG
** **************************************** ***************
AY310830 ATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCC
DQ822806 ATAAGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCC
************************************************************
AY310830 TTCCGGTATTCCGGGAGGCATGCCTGTCCGAGCGTCATCAAAAACCACTCAAGTAGTTTT
DQ822806 TTCCGGTATTCCGGGAGGCATGCCTGTCCGAGCGTCATCAAAAACCACTCAAGTAGTTTT
************************************************************
AY310830 GCTTGGTAATGAAAGAAGAGTTTGCTTGCGGATTCCCTTTCGAAATTCAATGGCGGAGAG
DQ822806 GCTTGGTAATGAAAGAAGAGTTTGCTTGCGGATTCCCTTTCGAAATTCAATGGCGGAGAG
************************************************************
AY310830 TCTCATGATTCCGGCGTAGTAATAACTTATTCGCTTGGTCATTGTAACAATCCTGCCCCA
DQ822806 TCTCATGATTCCGGCGTAGTAATAACTTATTCGCTTGGTCATTGTAACAATCCTGCCCCA
************************************************************
AY310830 AATCCCCAATTCTAGTGTTTGACCTCGGATCAGGTAGGGATACCCGCTGAACT-----
DQ822806 AATCCCCAATTCTAGTGTTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGC
*****************************************************
hard facts fast