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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AY310820: Comparing with sequences in the identified database
Accession number: AY310820 Genbank entry
Species annotation: uncultured Inocybe
Annotation: Uncultured Inocybe note PCR # TAM2031 18S ribosomal RNA gene,
Source publication: Kennedy,P.G., Izzo,A.D. and Bruns,T.D. High potential for common mycorrhizal networks between understory and canopy trees in a mixed evergreen forest Unpublished
Date of inclusion: 2010-08-18
Present best BLAST match: HQ604561 Genbank entry
Species annotation of this match: Inocybe assimilata ToL?
Annotation of this match: Inocybe assimilata isolate PK5674 voucher UBC F19807 18S ribosomal
BLAST E-value and score of this match (against AY310820): 0.0, 1063
Source publication: Berbee,M.L., Bradford,A.R. and Tang,S.-Y.M. Inocybes and other fungi of the Pacific Northwest Unpublished
Date of inclusion of this match: 2011-01-12
Previous best BLAST match: GU233360 Genbank entry
Species annotation of previous best BLAST match: Astrosporina subclavata ToL?
Annotation of this match: Astrosporina subclavata voucher PDD:77794 18S ribosomal RNA gene,
BLAST E-value and score of this match (against AY310820): 1e-142, 504
Source publication: Johnston,P.R. and Park,D. Barcoding New Zealand's fungi Unpublished
Date of inclusion of this match: 2010-08-18
Alignment
Below is the alignment of the insufficiently identified sequence (AY310820) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 96.2401455427532 Length: 1301 bp. Number of gaps: 2448
AY310820 ------------------------------------------------------------
HQ604561 -----------AGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAG
GU233360 CTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAG
AY310820 -----------------------AGCAGGCTGTTGCTGGCTT------GAGTGCATGTGC
HQ604561 GATCATTATCGAATTAAAATTAAAGCAGGCTGTTGCTGGCTT------GAGTGCATGTGC
GU233360 GATCATTATTGAATAAAACTTGAAGCAGGTTGTTGCTGGCTCTTCTCGGAGCGCATGTGC
****** *********** *** ********
AY310820 ACGCTTGTTTCTATCTTTATTTCTCCCAACTGTGCACAACTTGTAGACCCTTTTTGAGGA
HQ604561 ACGCTTGTTT-TATCTTTATTTCTCCCAACTGTGCACAACTTGTAGACCCTTTTTGAGGA
GU233360 ACACTTGTTC--TTCTTTATTTCTCC-AACTGTGCACAAATGGTAGACCTT---------
** ****** ************* ************ * ******* *
AY310820 TTGCTCGTGCTTCAAAAGCCAGCTTTGCTTCAGGTCTATGTTTTTAACAATCTCTGAATG
HQ604561 TTGCT-GTGCTTCAAAAGCCAGCTTTGCTTCAGGTCTATGTTTTTAACAATCTCTGAATG
GU233360 --------------------------------GGTCTATATCTTCA-CAATCTCTGAATG
******* * ** * *************
AY310820 TATTA--GAATGATTAGA-GTCTGGGGAATATACATACAACTTTCAGCAACGGATCTCTT
HQ604561 TATTA--GAATGATTAGA-GTCTGGGGAATATACATACAACTTTCAGCAACGGATCTCTT
GU233360 TATTATAGAATGATTTGATATCTGGGGAATATACATACAACTTTCAGCAACGGATCTCTT
***** ******** ** ****************************************
AY310820 GGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC
HQ604561 GGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC
GU233360 GGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTC
************************************************************
AY310820 AGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCT
HQ604561 AGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCT
GU233360 AGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCT
************************************************************
AY310820 GTTTGAGTGTCATTTAAAACTTCTCAACTGCTCCAAAATGGTGTGGCTTGGAAATGGGGG
HQ604561 GTTTGAGTGTCATTTAAAACTTCTCAACTGCTCCAAAATGGTGTGGCTTGGAAATGGGGG
GU233360 GTTTGAGTGTCATTTGAAACTTCTCAACCACTCCAAA-TGGTGTGGCTTGGAAATGGGGG
*************** ************ ******* **********************
AY310820 AGTGTGCAGGCTTTA-----GTCTGCTCCCCTGAAATGTATTAGTGGTGTCTGGGCAGAC
HQ604561 AGTGTGCAGGCTTTA-----GTCTGCTCCCCTGAAATGTATTAGTGGTGTCTGGGCAGAC
GU233360 AAAGTGCAGGCTTTATGAGAGTCTGCTCCCCTGAAATGCATTAGCGGTGTCTGGGCAGAC
* ************ ****************** ***** ***************
AY310820 T--ACTACAGGTGTGATAACTAT-CAACGCCTTGGTATATACTGCAGATTGTTGCTGCTT
HQ604561 T--ACTACAGGTGTGATAACTAT-CAACGCCTTGGTATATACTGCAGATTGTTGCTGCTT
GU233360 TTTACCACAGGTGTGATAACCATTCAATGCCTTGGTA----CTGCAGATTGCTGCCGCTT
* ** ************** ** *** ********* ********** *** ****
AY310820 CCAAC--------CTAATGACCAACTTGACCTCAAATCAGGTAGGATTACCCGCTGAACT
HQ604561 CCAAC--------CTAATGACCAACTTGACCTCAAATCAGGTAGGATTACCCGCTGAACT
GU233360 CCAACAACCTTTCTTAATGACCAATTTGACCTCAAATCAGGTAGGATTACCCGCTAAACT
***** ********** ****************************** ****
AY310820 ------------------------------------------------------------
HQ604561 TAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGT
GU233360 TAAGCATATCAATAAGCGGAGGA-------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 GAAGCGGGAAAAGCTCAAATTTGAAATCTGGCAGTTTTTGACTGTCCGAGTTGTAATCTA
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 GAGAAGTGTTACCTGTGCTGGACCGTGTACAAGTCTTCTGGAATGGAGCATCATAGAGGG
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 TGAGAATCCCGTCTTTGACACGGACTACCTGTACATTGTGGTATGCTCTCAAAGAGTCGA
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 GTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAAGCTAAATATTGGCG
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 AGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAAAGAGAGT
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 TAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCACGTTGGCTAGAAA
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 TCAGTCTTGCTTCTGCTTGGTGTACTTTCTGGTTGACGGGTCAGCATCAATTTTGACCAC
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 TGGATAAAGTCTCTGGGAATGTGGCATCTTTTTTAGATGTGTTAAAGCCCATTGTCGCAT
GU233360 ------------------------------------------------------------
AY310820 ------------------------------------------------------------
HQ604561 ACAGTGGTTGGGATTGAGGAACTCAGCACGCCCTGCAAGGGGCCAGGTTTTGACCATGTT
GU233360 ------------------------------------------------------------
AY310820 -----------------------------------------
HQ604561 CGTGCTTAGGATGCTGGCATAATGGCTTCAATCGACCCGTC
GU233360 -----------------------------------------
Accession AY310820: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: DQ822815 Genbank entry
Species annotation of this match: Inocybe sp. KGP46
Annotation of this match: Inocybe sp. KGP46 18S ribosomal RNA gene, partial sequence;
BLAST E-value and of this match (against AY310820): 0.0, 1063
Source publication: Peay,K.G., Bruns,T.D., Kennedy,P.G., Bergemann,S.E. and Garbelotto,M. A strong species-area relationship for eukaryotic soil microbes: island size matters for ectomycorrhizal fungi Ecol. Lett. 10 (6), 470-480 (2007)
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match in the insufficiently identified database.
Alignment
Below is the alignment of the insufficiently identified sequence (AY310820) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 100 Length: 743 bp. Number of gaps: 1293
AY310820 -------------------------------------------------AGCAGGCTGTT
DQ822815 AGGTTTCCGTAGGTGACCTGCGGAAGGATCATTATCGAATTAAAATTAAAGCAGGCTGTT
***********
AY310820 GCTGGCTTGAGTGCATGTGCACGCTTGTTTCTATCTTTATTTCTCCCAACTGTGCACAAC
DQ822815 GCTGGCTTGAGTGCATGTGCACGCTTGTTT-TATCTTTATTTCTCCCAACTGTGCACAAC
****************************** *****************************
AY310820 TTGTAGACCCTTTTTGAGGATTGCTCGTGCTTCAAAAGCCAGCTTTGCTTCAGGTCTATG
DQ822815 TTGTAGACCCTTTTTGAGGATTGCT-GTGCTTCAAAAGCCAGCTTTGCTTCAGGTCTATG
************************* **********************************
AY310820 TTTTTAACAATCTCTGAATGTATTAGAATGATTAGAGTCTGGGGAATATACATACAACTT
DQ822815 TTTTTAACAATCTCTGAATGTATTAGAATGATTAGAGTCTGGGGAATATACATACAACTT
************************************************************
AY310820 TCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA
DQ822815 TCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA
************************************************************
AY310820 TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTA
DQ822815 TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCCTTGGTA
************************************************************
AY310820 TTCCGAGGAGCATGCCTGTTTGAGTGTCATTTAAAACTTCTCAACTGCTCCAAAATGGTG
DQ822815 TTCCGAGGAGCATGCCTGTTTGAGTGTCATTTAAAACTTCTCAACTGCTCCAAAATGGTG
************************************************************
AY310820 TGGCTTGGAAATGGGGGAGTGTGCAGGCTTTAGTCTGCTCCCCTGAAATGTATTAGTGGT
DQ822815 TGGCTTGGAAATGGGGGAGTGTGCAGGCTTTAGTCTGCTCCCCTGAAATGTATTAGTGGT
************************************************************
AY310820 GTCTGGGCAGACTACTACAGGTGTGATAACTATCAACGCCTTGGTATATACTGCAGATTG
DQ822815 GTCTGGGCAGACTACTACAGGTGTGATAACTATCAACGCCTTGGTATATACTGCAGATTG
************************************************************
AY310820 TTGCTGCTTCCAACCTAATGACCAACTTGACCTCAAATCAGGTAGGATTACCCGCTGAAC
DQ822815 TTGCTGCTTCCAACCTAATGACCAACTTGACCTCAAATCAGGTAGGATTACCCGCTGAAC
************************************************************
AY310820 T-----------------------------------------------------------
DQ822815 TTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAG
*
AY310820 ------------------------------------------------------------
DQ822815 TGAAGCGGGAAAAGCTCAAATTTGAAATCTGGCAGTTTTTGACTGTCCGAGTTGTANTCT
AY310820 -----------------------
DQ822815 AGAGAAGTGTTACCTGTGCTGAC
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