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Provided that the accession number you specified is present in the database of insufficiently identified sequences,
it's best BLAST match in the database of identified sequences - and also the previous best BLAST match, if present -
will be shown together with some statistics and additional information. In addition, the best (and previous best, if present)
BLAST match in the database of insufficiently identified sequences will be shown.
Accession AJ430405: Comparing with sequences in the identified database
Accession number: AJ430405 Genbank entry
Species annotation: axenic ectomycorrhizal isolate (Helotiales)
Annotation: Axenic ectomycorrhizal isolate (Helotiales) 18S rRNA gene
Source publication: Vralstad,T. Molecular ecology of root-associated mycorrhizal and non-mycorrhizal ascomycetes Thesis (2001) Department of Biology, University of Oslo, Oslo, Norway
Date of inclusion: 2010-08-18
Present best BLAST match: FJ000405 Genbank entry
Species annotation of this match: Tetracladium breve ToL?
Annotation of this match: Tetracladium breve strain CCM F-12505 18S ribosomal RNA gene,
BLAST E-value and score of this match (against AJ430405): 0.0, 666
Source publication: Charette,N., Maranova,L., Letourneau,A., Baerlocher,F. and Ramaiah,S. ITS barcoding of single aquatic hyphomycete spores using Whatman FTA filter paper technology Unpublished
Date of inclusion of this match: 2010-08-18
This sequence lacks a previous (now obsolete) best BLAST match.
Alignment
Below is the alignment of the insufficiently identified sequence (AJ430405) and the best BLAST match from the identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 95.7537154989384 Length: 543 bp. Number of gaps: 1014
AJ430405 ------------CATTACCGAGTTCATGCCCTCAC--GGGTAGACCTCCCACCCTTTGTA
FJ000405 TCTGGGAAGGATCATTACCGAGTTCATGCCCTGAAAAGGGTAGATCTCCCACCCTTTGTA
******************** * ******* ***************
AJ430405 TACCTTACCTTTTGTTGCTTTGGCGGGCCGCCTGGCTACTGGCTTCGGCTGGTAAGTGCC
FJ000405 TACCTTACCTTT-GTTGCTTTGGCGGGCCGCCTAGCTACTGGCTTCGGCTGGTAAGTGCC
************ ******************** **************************
AJ430405 CGCCAGAGGACCCCAAACCCAAACCCATTTATAGTGTCGTCTGAGCAAAA-GTTTAATAT
FJ000405 CGCCAGAGGACCCAAAACCCTGA---ATTATTAGTGTCGTCTGAGTAAAATATTTAATAT
************* ****** * *** ************** **** ********
AJ430405 TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGC
FJ000405 TTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGC
************************************************************
AJ430405 GATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGC
FJ000405 GATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGC
************************************************************
AJ430405 CCCTTGGTATTCCGAGGGGCATGCCTATTCGAGCGTCATTATCACCCCTCAAGCTCCGGC
FJ000405 CCCTTGGTATTCCGAGGGGCATGCCTATTCGAGCGTCATTATCACCCCTCAAGCTTCAGC
******************************************************* * **
AJ430405 TTGGTGTTGAGGCCTGCTGTCAAGGCACCCTCTAAAATCAGTGGCAGTGCCGTCAGGCTC
FJ000405 TTGGTGTTGAGGCCTGCTGTCAAGGCAGCCTCTAAAATCAGTGGCAGTGCTGTCAGGCTC
*************************** ********************** *********
AJ430405 TAAGCGTAGTAAA-TCCATCGCTATAGAC-CCGGGCGGACGCTCGCCAGAACACCCCCAT
FJ000405 TAAGCGTAGTAAAATTCATCGCTATAGACACCTGGTGGACACTCGCCAGAAC-CCCCAAT
************* * ************* ** ** **** *********** **** **
AJ430405 TTTTAATGATTGA-----------------------------------------------
FJ000405 TTTTAATGATTGACCTCGGATTAGGTAGGGATACCCGCTGAACTTAAGCATATCAAATGA
*************
AJ430405 ---
FJ000405 TGA
Accession AJ430405: Comparing with sequences in the insufficiently identified database
Present best BLAST match to the insufficiently identified database: AB776690 Genbank entry
Species annotation of this match: Tetracladium sp. SMU-1
Annotation of this match: Tetracladium sp. SMU-1 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2,
BLAST E-value and of this match (against AJ430405): 0.0, 928
Source publication: Tsuji,M., Fujiu,S., Kudoh,S. and Hoshino,T. ITS region sequence of fungi isolated from lakes in skarvsnes ice-free area Unpublished
Date of inclusion of this match: 2014-11-03
Previous best BLAST match in the insufficiently identified database: AY345353 Genbank entry
Species annotation of this match: ectomycorrhizal isolate (Helotiales)
Annotation of this match: Ectomycorrhizal isolate (Helotiales) isolate CC16/1d 18S ribosomal
BLAST E-value and score of this match (against AJ430405): 0.0, 920
Source publication: Bradner,J.R. Antarctic microfungi as a potential bioresource Thesis (2003) Dept. of Biological Sciences, Macquarie University, Sydney, NSW, Australia
Date of inclusion of this match: 2010-08-18
Alignment
Below is the alignment of the insufficiently identified sequence (AJ430405) and the best BLAST match from the insufficiently identified database.
If available, the next best BLAST match is also included. Note that this is a Clustal W alignment, and that it as
such may differ slightly from the one performed by BLAST.
Percent identity (of non-gapped bp.): 99.5864920744314 Length: 540 bp. Number of gaps: 1515
AJ430405 --------------------------CATTACCGAGTTCATGCCCTCACGGGTAGACCTC
AB776690 -------------------GAAGGATCATTACCGAGTTCATGCCCTCACGGGTAGACCTC
AY345353 TCCGCTAGGTGAACCTGCGGAAGGATCATTACCGAGTTCATGCCCTCACGGGTAGACCTC
**********************************
AJ430405 CCACCCTTTGTATACCTTACCTTTTGTTGCTTTGGCGGGCCGCCTGGCTACTGGCTTCGG
AB776690 CCACCCTTTGTATACCTTACCTTTTGTTGCTTTGGCGGGCCGCCTAGCTACTGGCTTCGG
AY345353 CCACCCTTTGTATACCTTACCTTTTGTTGCTTTGGCGGGCCGCCTAGCTACTGGCTTCGG
********************************************* **************
AJ430405 CTGGTAAGTGCCCGCCAGAGGACCCCAAACCCAAACCCATTTATAGTGTCGTCTGAGCAA
AB776690 CTGGTAAGTGCCCGCCAGAGGACCCCAAACCCAAACCCATTTATAGTGTCGTCTGAGCAA
AY345353 CTGGTAAGTGCCCGCCAGAGGACCCCAAACCCAAACCCATTTATAGTGTCGTCTGAGCAA
************************************************************
AJ430405 AAGTTTAATATTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACG
AB776690 AAGTTTAATATTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACG
AY345353 AAGTTTAATATATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACG
*********** ************************************************
AJ430405 CAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAAC
AB776690 CAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAAC
AY345353 CAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAAC
************************************************************
AJ430405 GCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTATTCGAGCGTCATTATCACCCCT
AB776690 GCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTATTCGAGCGTCATTATCACCCCT
AY345353 GCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTATTCGAGCGTCATTATCACCCCT
************************************************************
AJ430405 CAAGCTCCGGCTTGGTGTTGAGGCCTGCTGTCAAGGCACCCTCTAAAATCAGTGGCAGTG
AB776690 CAAGCTCCGGCTTGGTGTTGAGGCCTGCTGTAAAGGCACCCTCTAAAATCAGTGGCAGTG
AY345353 CAAGCTCCGGCTTGGTGTTGAGGCCTGCTGTAAAGGCACCCTCTAAAATCAGTGGCAGTG
******************************* ****************************
AJ430405 CCGTCAGGCTCTAAGCGTAGTAAATCCATCGCTATAGACCCGGGCGGACGCTCGCCAGAA
AB776690 CCGTCAGGCTCTAAGCGTAGTAAATCCATCGCTATAGACCCGGGCGGACGCTCGCCAGAA
AY345353 CCGTCAGGCTCTAAGCGTAGTAAATCCATCGCTATAGACCCGGGCGGACGCTCGCCAGAA
************************************************************
AJ430405 CACCCCCATTTTTAATGATTGA--------------------------------------
AB776690 CACCCCCATTTTTAATGATTGACCTCGGATTAGGTAGGGATACCCGCTGAACTTAAGCAT
AY345353 CACCCCCATTTTTAATGATTGACCTCGGATTAGGTAGG----------------------
**********************
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